How to run Spike Sorting

Note

This is a quick how-to on spike sorting. See here for a long-form tutorial.

The preprocessing options are: {
    "1": [
        "phase_shift",
        {}
    ],
    "2": [
        "bandpass_filter",
        {
            "freq_max": 6000,
            "freq_min": 300
        }
    ],
    "3": [
        "common_reference",
        {
            "operator": "median",
            "reference": "global"
        }
    ]
}
/home/runner/work/spikewrap/spikewrap/spikewrap/process/_loading.py:147: UserWarning: The sessions or runs provided for are not in creation datetime order.
They will be concatenated in the order provided, as:
['run-002_g0_imec0', 'run-001_g0_imec0'].
  warnings.warn(

Loading data from path: /home/runner/work/spikewrap/spikewrap/spikewrap/examples/example_tiny_data/spikeglx/rawdata/sub-001/ses-001/ephys/run-002_g0_imec0

Loading data from path: /home/runner/work/spikewrap/spikewrap/spikewrap/examples/example_tiny_data/spikeglx/rawdata/sub-001/ses-001/ephys/run-001_g0_imec0

Concatenating raw recordings in the following order:['run-002_g0_imec0', 'run-001_g0_imec0']
Warning! The recording is already filtered, but mountainsort5 filter is enabled
filtering
whitening
write_binary_recording
engine=process - n_jobs=4 - samples_per_chunk=30,000 - chunk_memory=21.97 MiB - total_memory=87.89 MiB - chunk_duration=1.00s

write_binary_recording (workers: 1 processes):   0%|          | 0/1 [00:00<?, ?it/s]
write_binary_recording (workers: 1 processes): 100%|██████████| 1/1 [00:01<00:00,  1.32s/it]
write_binary_recording (workers: 1 processes): 100%|██████████| 1/1 [00:01<00:00,  1.32s/it]
Using training recording of duration 300 sec with the sampling mode uniform
*** MS5 Elapsed time for SCHEME2 get_sampled_recording_for_training: 0.000 seconds ***
Running phase 1 sorting
Number of channels: 192
Number of timepoints: 30000
Sampling frequency: 30000.0 Hz
Channel 0: [250.   0.]
Channel 1: [282.   0.]
Channel 2: [250.  15.]
Channel 3: [282.  15.]
Channel 4: [250.  30.]
Channel 5: [282.  30.]
Channel 6: [250.  45.]
Channel 7: [282.  45.]
Channel 8: [250.  60.]
Channel 9: [282.  60.]
Channel 10: [250.  75.]
Channel 11: [282.  75.]
Channel 12: [250.  90.]
Channel 13: [282.  90.]
Channel 14: [250. 105.]
Channel 15: [282. 105.]
Channel 16: [250. 120.]
Channel 17: [282. 120.]
Channel 18: [250. 135.]
Channel 19: [282. 135.]
Channel 20: [250. 150.]
Channel 21: [282. 150.]
Channel 22: [250. 165.]
Channel 23: [282. 165.]
Channel 24: [250. 180.]
Channel 25: [282. 180.]
Channel 26: [250. 195.]
Channel 27: [282. 195.]
Channel 28: [250. 210.]
Channel 29: [282. 210.]
Channel 30: [250. 225.]
Channel 31: [282. 225.]
Channel 32: [250. 240.]
Channel 33: [282. 240.]
Channel 34: [250. 255.]
Channel 35: [282. 255.]
Channel 36: [250. 270.]
Channel 37: [282. 270.]
Channel 38: [250. 285.]
Channel 39: [282. 285.]
Channel 40: [250. 300.]
Channel 41: [282. 300.]
Channel 42: [250. 315.]
Channel 43: [282. 315.]
Channel 44: [250. 330.]
Channel 45: [282. 330.]
Channel 46: [250. 345.]
Channel 47: [282. 345.]
Channel 48: [250. 360.]
Channel 49: [282. 360.]
Channel 50: [250. 375.]
Channel 51: [282. 375.]
Channel 52: [250. 390.]
Channel 53: [282. 390.]
Channel 54: [250. 405.]
Channel 55: [282. 405.]
Channel 56: [250. 420.]
Channel 57: [282. 420.]
Channel 58: [250. 435.]
Channel 59: [282. 435.]
Channel 60: [250. 450.]
Channel 61: [282. 450.]
Channel 62: [250. 465.]
Channel 63: [282. 465.]
Channel 64: [250. 480.]
Channel 65: [282. 480.]
Channel 66: [250. 495.]
Channel 67: [282. 495.]
Channel 68: [250. 510.]
Channel 69: [282. 510.]
Channel 70: [250. 525.]
Channel 71: [282. 525.]
Channel 72: [250. 540.]
Channel 73: [282. 540.]
Channel 74: [250. 555.]
Channel 75: [282. 555.]
Channel 76: [250. 570.]
Channel 77: [282. 570.]
Channel 78: [250. 585.]
Channel 79: [282. 585.]
Channel 80: [250. 600.]
Channel 81: [282. 600.]
Channel 82: [250. 615.]
Channel 83: [282. 615.]
Channel 84: [250. 630.]
Channel 85: [282. 630.]
Channel 86: [250. 645.]
Channel 87: [282. 645.]
Channel 88: [250. 660.]
Channel 89: [282. 660.]
Channel 90: [250. 675.]
Channel 91: [282. 675.]
Channel 92: [250. 690.]
Channel 93: [282. 690.]
Channel 94: [250. 705.]
Channel 95: [282. 705.]
Channel 96: [250. 720.]
Channel 97: [282. 720.]
Channel 98: [250. 735.]
Channel 99: [282. 735.]
Channel 100: [250. 750.]
Channel 101: [282. 750.]
Channel 102: [250. 765.]
Channel 103: [282. 765.]
Channel 104: [250. 780.]
Channel 105: [282. 780.]
Channel 106: [250. 795.]
Channel 107: [282. 795.]
Channel 108: [250. 810.]
Channel 109: [282. 810.]
Channel 110: [250. 825.]
Channel 111: [282. 825.]
Channel 112: [250. 840.]
Channel 113: [282. 840.]
Channel 114: [250. 855.]
Channel 115: [282. 855.]
Channel 116: [250. 870.]
Channel 117: [282. 870.]
Channel 118: [250. 885.]
Channel 119: [282. 885.]
Channel 120: [250. 900.]
Channel 121: [282. 900.]
Channel 122: [250. 915.]
Channel 123: [282. 915.]
Channel 124: [250. 930.]
Channel 125: [282. 930.]
Channel 126: [250. 945.]
Channel 127: [282. 945.]
Channel 128: [250. 960.]
Channel 129: [282. 960.]
Channel 130: [250. 975.]
Channel 131: [282. 975.]
Channel 132: [250. 990.]
Channel 133: [282. 990.]
Channel 134: [ 250. 1005.]
Channel 135: [ 282. 1005.]
Channel 136: [ 250. 1020.]
Channel 137: [ 282. 1020.]
Channel 138: [ 250. 1035.]
Channel 139: [ 282. 1035.]
Channel 140: [ 250. 1050.]
Channel 141: [ 282. 1050.]
Channel 142: [ 250. 1065.]
Channel 143: [ 282. 1065.]
Channel 144: [ 250. 1080.]
Channel 145: [ 282. 1080.]
Channel 146: [ 250. 1095.]
Channel 147: [ 282. 1095.]
Channel 148: [ 250. 1110.]
Channel 149: [ 282. 1110.]
Channel 150: [ 250. 1125.]
Channel 151: [ 282. 1125.]
Channel 152: [ 250. 1140.]
Channel 153: [ 282. 1140.]
Channel 154: [ 250. 1155.]
Channel 155: [ 282. 1155.]
Channel 156: [ 250. 1170.]
Channel 157: [ 282. 1170.]
Channel 158: [ 250. 1185.]
Channel 159: [ 282. 1185.]
Channel 160: [ 250. 1200.]
Channel 161: [ 282. 1200.]
Channel 162: [ 250. 1215.]
Channel 163: [ 282. 1215.]
Channel 164: [ 250. 1230.]
Channel 165: [ 282. 1230.]
Channel 166: [ 250. 1245.]
Channel 167: [ 282. 1245.]
Channel 168: [ 250. 1260.]
Channel 169: [ 282. 1260.]
Channel 170: [ 250. 1275.]
Channel 171: [ 282. 1275.]
Channel 172: [ 250. 1290.]
Channel 173: [ 282. 1290.]
Channel 174: [ 250. 1305.]
Channel 175: [ 282. 1305.]
Channel 176: [ 250. 1320.]
Channel 177: [ 282. 1320.]
Channel 178: [ 250. 1335.]
Channel 179: [ 282. 1335.]
Channel 180: [ 250. 1350.]
Channel 181: [ 282. 1350.]
Channel 182: [ 250. 1365.]
Channel 183: [ 282. 1365.]
Channel 184: [ 250. 1380.]
Channel 185: [ 282. 1380.]
Channel 186: [ 250. 1395.]
Channel 187: [ 282. 1395.]
Channel 188: [ 250. 1410.]
Channel 189: [ 282. 1410.]
Channel 190: [ 250. 1425.]
Channel 191: [ 282. 1425.]
Loading traces
*** MS5 Elapsed time for load_traces: 0.000 seconds ***
Detecting spikes

Adjacency for detect spikes with channel radius 200
[[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53], [2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55], [2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55], [4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57], [4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57], [6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59], [6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59], [8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61], [8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61], [10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63], [10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63], [12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65], [12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65], [14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67], [14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67], [16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69], [16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69], [18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 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168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191]]

m = 0 (nbhd size: 28)
m = 1 (nbhd size: 28)
m = 2 (nbhd size: 30)
m = 3 (nbhd size: 30)
m = 4 (nbhd size: 32)
m = 5 (nbhd size: 32)
m = 6 (nbhd size: 34)
m = 7 (nbhd size: 34)
m = 8 (nbhd size: 36)
m = 9 (nbhd size: 36)
m = 10 (nbhd size: 38)
m = 11 (nbhd size: 38)
m = 12 (nbhd size: 40)
m = 13 (nbhd size: 40)
m = 14 (nbhd size: 42)
m = 15 (nbhd size: 42)
m = 16 (nbhd size: 44)
m = 17 (nbhd size: 44)
m = 18 (nbhd size: 46)
m = 19 (nbhd size: 46)
m = 20 (nbhd size: 48)
m = 21 (nbhd size: 48)
m = 22 (nbhd size: 50)
m = 23 (nbhd size: 50)
m = 24 (nbhd size: 52)
m = 25 (nbhd size: 52)
m = 26 (nbhd size: 54)
m = 27 (nbhd size: 54)
m = 28 (nbhd size: 54)
m = 29 (nbhd size: 54)
m = 30 (nbhd size: 54)
m = 31 (nbhd size: 54)
m = 32 (nbhd size: 54)
m = 33 (nbhd size: 54)
m = 34 (nbhd size: 54)
m = 35 (nbhd size: 54)
m = 36 (nbhd size: 54)
m = 37 (nbhd size: 54)
m = 38 (nbhd size: 54)
m = 39 (nbhd size: 54)
m = 40 (nbhd size: 54)
m = 41 (nbhd size: 54)
m = 42 (nbhd size: 54)
m = 43 (nbhd size: 54)
m = 44 (nbhd size: 54)
m = 45 (nbhd size: 54)
m = 46 (nbhd size: 54)
m = 47 (nbhd size: 54)
m = 48 (nbhd size: 54)
m = 49 (nbhd size: 54)
m = 50 (nbhd size: 54)
m = 51 (nbhd size: 54)
m = 52 (nbhd size: 54)
m = 53 (nbhd size: 54)
m = 54 (nbhd size: 54)
m = 55 (nbhd size: 54)
m = 56 (nbhd size: 54)
m = 57 (nbhd size: 54)
m = 58 (nbhd size: 54)
m = 59 (nbhd size: 54)
m = 60 (nbhd size: 54)
m = 61 (nbhd size: 54)
m = 62 (nbhd size: 54)
m = 63 (nbhd size: 54)
m = 64 (nbhd size: 54)
m = 65 (nbhd size: 54)
m = 66 (nbhd size: 54)
m = 67 (nbhd size: 54)
m = 68 (nbhd size: 54)
m = 69 (nbhd size: 54)
m = 70 (nbhd size: 54)
m = 71 (nbhd size: 54)
m = 72 (nbhd size: 54)
m = 73 (nbhd size: 54)
m = 74 (nbhd size: 54)
m = 75 (nbhd size: 54)
m = 76 (nbhd size: 54)
m = 77 (nbhd size: 54)
m = 78 (nbhd size: 54)
m = 79 (nbhd size: 54)
m = 80 (nbhd size: 54)
m = 81 (nbhd size: 54)
m = 82 (nbhd size: 54)
m = 83 (nbhd size: 54)
m = 84 (nbhd size: 54)
m = 85 (nbhd size: 54)
m = 86 (nbhd size: 54)
m = 87 (nbhd size: 54)
m = 88 (nbhd size: 54)
m = 89 (nbhd size: 54)
m = 90 (nbhd size: 54)
m = 91 (nbhd size: 54)
m = 92 (nbhd size: 54)
m = 93 (nbhd size: 54)
m = 94 (nbhd size: 54)
m = 95 (nbhd size: 54)
m = 96 (nbhd size: 54)
m = 97 (nbhd size: 54)
m = 98 (nbhd size: 54)
m = 99 (nbhd size: 54)
m = 100 (nbhd size: 54)
m = 101 (nbhd size: 54)
m = 102 (nbhd size: 54)
m = 103 (nbhd size: 54)
m = 104 (nbhd size: 54)
m = 105 (nbhd size: 54)
m = 106 (nbhd size: 54)
m = 107 (nbhd size: 54)
m = 108 (nbhd size: 54)
m = 109 (nbhd size: 54)
m = 110 (nbhd size: 54)
m = 111 (nbhd size: 54)
m = 112 (nbhd size: 54)
m = 113 (nbhd size: 54)
m = 114 (nbhd size: 54)
m = 115 (nbhd size: 54)
m = 116 (nbhd size: 54)
m = 117 (nbhd size: 54)
m = 118 (nbhd size: 54)
m = 119 (nbhd size: 54)
m = 120 (nbhd size: 54)
m = 121 (nbhd size: 54)
m = 122 (nbhd size: 54)
m = 123 (nbhd size: 54)
m = 124 (nbhd size: 54)
m = 125 (nbhd size: 54)
m = 126 (nbhd size: 54)
m = 127 (nbhd size: 54)
m = 128 (nbhd size: 54)
m = 129 (nbhd size: 54)
m = 130 (nbhd size: 54)
m = 131 (nbhd size: 54)
m = 132 (nbhd size: 54)
m = 133 (nbhd size: 54)
m = 134 (nbhd size: 54)
m = 135 (nbhd size: 54)
m = 136 (nbhd size: 54)
m = 137 (nbhd size: 54)
m = 138 (nbhd size: 54)
m = 139 (nbhd size: 54)
m = 140 (nbhd size: 54)
m = 141 (nbhd size: 54)
m = 142 (nbhd size: 54)
m = 143 (nbhd size: 54)
m = 144 (nbhd size: 54)
m = 145 (nbhd size: 54)
m = 146 (nbhd size: 54)
m = 147 (nbhd size: 54)
m = 148 (nbhd size: 54)
m = 149 (nbhd size: 54)
m = 150 (nbhd size: 54)
m = 151 (nbhd size: 54)
m = 152 (nbhd size: 54)
m = 153 (nbhd size: 54)
m = 154 (nbhd size: 54)
m = 155 (nbhd size: 54)
m = 156 (nbhd size: 54)
m = 157 (nbhd size: 54)
m = 158 (nbhd size: 54)
m = 159 (nbhd size: 54)
m = 160 (nbhd size: 54)
m = 161 (nbhd size: 54)
m = 162 (nbhd size: 54)
m = 163 (nbhd size: 54)
m = 164 (nbhd size: 54)
m = 165 (nbhd size: 54)
m = 166 (nbhd size: 52)
m = 167 (nbhd size: 52)
m = 168 (nbhd size: 50)
m = 169 (nbhd size: 50)
m = 170 (nbhd size: 48)
m = 171 (nbhd size: 48)
m = 172 (nbhd size: 46)
m = 173 (nbhd size: 46)
m = 174 (nbhd size: 44)
m = 175 (nbhd size: 44)
m = 176 (nbhd size: 42)
m = 177 (nbhd size: 42)
m = 178 (nbhd size: 40)
m = 179 (nbhd size: 40)
m = 180 (nbhd size: 38)
m = 181 (nbhd size: 38)
m = 182 (nbhd size: 36)
m = 183 (nbhd size: 36)
m = 184 (nbhd size: 34)
m = 185 (nbhd size: 34)
m = 186 (nbhd size: 32)
m = 187 (nbhd size: 32)
m = 188 (nbhd size: 30)
m = 189 (nbhd size: 30)
m = 190 (nbhd size: 28)
m = 191 (nbhd size: 28)
Detected 128 spikes
*** MS5 Elapsed time for detect_spikes: 0.196 seconds ***
Removing duplicate times
*** MS5 Elapsed time for remove_duplicate_times: 0.000 seconds ***
Extracting 127 snippets
*** MS5 Elapsed time for extract_snippets: 0.178 seconds ***
Computing PCA features with npca=576
*** MS5 Elapsed time for compute_pca_features: 0.064 seconds ***
Isosplit6 clustering with npca_per_subdivision=10
Found 4 clusters
*** MS5 Elapsed time for isosplit6_subdivision_method: 0.017 seconds ***
Computing templates
*** MS5 Elapsed time for compute_templates: 0.014 seconds ***
Determining optimal alignment of templates
Template alignment converged.
Align templates offsets:  [ 0  7 -4  5]
*** MS5 Elapsed time for align_templates: 0.016 seconds ***
Aligning snippets
*** MS5 Elapsed time for align_snippets: 0.001 seconds ***
Clustering aligned snippets
Computing PCA features with npca=576
*** MS5 Elapsed time for compute_pca_features: 0.061 seconds ***
Isosplit6 clustering with npca_per_subdivision=10
*** MS5 Elapsed time for isosplit6_subdivision_method: 0.012 seconds ***
Found 3 clusters after alignment
Computing templates
*** MS5 Elapsed time for compute_templates: 0.014 seconds ***
Offsetting times to peak
Offsets to peak: [-20   7   5]
*** MS5 Elapsed time for determine_offsets_to_peak: 0.000 seconds ***
Sorting times
*** MS5 Elapsed time for sorting times: 0.000 seconds ***
Removing out of bounds times
*** MS5 Elapsed time for removing out of bounds times: 0.000 seconds ***
Reordering units
*** MS5 Elapsed time for reordering units: 0.000 seconds ***
Creating sorting object
*** MS5 Elapsed time for creating sorting object: 0.000 seconds ***
*** MS5 Elapsed time for SCHEME2 sorting_scheme1: 0.590 seconds ***
*** MS5 Elapsed time for SCHEME2 get_times_labels_from_sorting: 0.000 seconds ***
Loading training traces
*** MS5 Elapsed time for SCHEME2 training_recording.get_traces: 0.001 seconds ***
Training classifier
*** MS5 Elapsed time for SCHEME2 training classifier step 1: 0.501 seconds ***
Adding snippets from phase 1 sorting
Fitting models
*** MS5 Elapsed time for SCHEME2 fitting models: 43.452 seconds ***
Chunk size: 17.361133333333335 sec
Time chunk 1 of 1
Loading traces
*** MS5 Elapsed time for SCHEME2 loading traces: 0.000 seconds ***
Detecting spikes

Adjacency for detect spikes with channel radius 50
[[0, 1, 2, 3, 4, 5, 6], [0, 1, 2, 3, 4, 5, 7], [0, 1, 2, 3, 4, 5, 6, 7, 8], [0, 1, 2, 3, 4, 5, 6, 7, 9], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 11], [0, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12], [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 13], [2, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14], [3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 15], [4, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16], [5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 17], [6, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18], [7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 19], [8, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20], [9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21], [10, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22], [11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 23], [12, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24], [13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 25], [14, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26], [15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 27], [16, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28], [17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 29], [18, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30], [19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 31], [20, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32], [21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 33], [22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34], [23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 35], [24, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36], [25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 37], [26, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38], [27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 39], [28, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40], [29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 41], [30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42], [31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 43], [32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44], [33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 45], [34, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46], [35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47], [36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48], [37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 49], [38, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50], [39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 51], [40, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52], [41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 53], [42, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54], [43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55], [44, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56], [45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 57], [46, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58], [47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 59], [48, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60], [49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 61], [50, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62], [51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 63], [52, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64], [53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 65], [54, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66], [55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 67], [56, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68], [57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 69], [58, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70], [59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 71], [60, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72], [61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 73], [62, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74], [63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 75], [64, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76], [65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 77], [66, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78], [67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 79], [68, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80], [69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 81], [70, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82], [71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 83], [72, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84], [73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 85], [74, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86], [75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 87], [76, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88], [77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 89], [78, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90], [79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 91], [80, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92], [81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 93], [82, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94], [83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 95], [84, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96], [85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 97], [86, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98], [87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 99], [88, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100], [89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 101], [90, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102], [91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 103], [92, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104], [93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 105], [94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106], [95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 107], [96, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108], [97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 109], [98, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110], [99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111], [100, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112], [101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 113], [102, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114], [103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 115], [104, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116], [105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 117], [106, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118], [107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 119], [108, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120], [109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121], [110, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122], [111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 123], [112, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124], [113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 125], [114, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126], [115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 127], [116, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128], [117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 129], [118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130], [119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 131], [120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132], [121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 133], [122, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134], [123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 135], [124, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136], [125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137], [126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], [127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139], [128, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140], [129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 141], [130, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142], [131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 143], [132, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144], [133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 145], [134, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146], [135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 147], [136, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148], [137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 149], [138, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150], [139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 151], [140, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152], [141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 153], [142, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154], [143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 155], [144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156], [145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 157], [146, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158], [147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 159], [148, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160], [149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 161], [150, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162], [151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 163], [152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164], [153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 165], [154, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166], [155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 167], [156, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168], [157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 169], [158, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170], [159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 171], [160, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172], [161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 173], [162, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174], [163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 175], [164, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176], [165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 177], [166, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178], [167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 179], [168, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180], [169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 181], [170, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182], [171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 183], [172, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184], [173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 185], [174, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186], [175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 187], [176, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188], [177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 189], [178, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190], [179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 191], [180, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [182, 184, 185, 186, 187, 188, 189, 190, 191], [183, 184, 185, 186, 187, 188, 189, 190, 191], [184, 186, 187, 188, 189, 190, 191], [185, 186, 187, 188, 189, 190, 191]]

Scheme 2 detected 134 spikes in chunk 1 of 1
*** MS5 Elapsed time for SCHEME2 detecting spikes: 0.244 seconds ***
Extracting and classifying snippets
*** MS5 Elapsed time for SCHEME2 extracting and classifying snippets: 0.178 seconds ***
Updating events
Removing duplicates
*** MS5 Elapsed time for SCHEME2 updating events: 0.000 seconds ***
Concatenating results
*** MS5 Elapsed time for SCHEME2 concatenating results: 0.000 seconds ***
Perorming label mapping
*** MS5 Elapsed time for SCHEME2 label mapping: 0.000 seconds ***
Creating sorting object
*** MS5 Elapsed time for SCHEME2 creating sorting object: 0.000 seconds ***
mountainsort5 run time 55.61s
Warning! The recording is already filtered, but mountainsort5 filter is enabled
filtering
whitening
write_binary_recording
engine=process - n_jobs=4 - samples_per_chunk=30,000 - chunk_memory=21.97 MiB - total_memory=87.89 MiB - chunk_duration=1.00s

write_binary_recording (workers: 1 processes):   0%|          | 0/1 [00:00<?, ?it/s]
write_binary_recording (workers: 1 processes): 100%|██████████| 1/1 [00:01<00:00,  1.30s/it]
write_binary_recording (workers: 1 processes): 100%|██████████| 1/1 [00:01<00:00,  1.30s/it]
Using training recording of duration 300 sec with the sampling mode uniform
*** MS5 Elapsed time for SCHEME2 get_sampled_recording_for_training: 0.000 seconds ***
Running phase 1 sorting
Number of channels: 192
Number of timepoints: 30000
Sampling frequency: 30000.0 Hz
Channel 0: [500. 720.]
Channel 1: [532. 720.]
Channel 2: [500. 735.]
Channel 3: [532. 735.]
Channel 4: [500. 750.]
Channel 5: [532. 750.]
Channel 6: [500. 765.]
Channel 7: [532. 765.]
Channel 8: [500. 780.]
Channel 9: [532. 780.]
Channel 10: [500. 795.]
Channel 11: [532. 795.]
Channel 12: [500. 810.]
Channel 13: [532. 810.]
Channel 14: [500. 825.]
Channel 15: [532. 825.]
Channel 16: [500. 840.]
Channel 17: [532. 840.]
Channel 18: [500. 855.]
Channel 19: [532. 855.]
Channel 20: [500. 870.]
Channel 21: [532. 870.]
Channel 22: [500. 885.]
Channel 23: [532. 885.]
Channel 24: [500. 900.]
Channel 25: [532. 900.]
Channel 26: [500. 915.]
Channel 27: [532. 915.]
Channel 28: [500. 930.]
Channel 29: [532. 930.]
Channel 30: [500. 945.]
Channel 31: [532. 945.]
Channel 32: [500. 960.]
Channel 33: [532. 960.]
Channel 34: [500. 975.]
Channel 35: [532. 975.]
Channel 36: [500. 990.]
Channel 37: [532. 990.]
Channel 38: [ 500. 1005.]
Channel 39: [ 532. 1005.]
Channel 40: [ 500. 1020.]
Channel 41: [ 532. 1020.]
Channel 42: [ 500. 1035.]
Channel 43: [ 532. 1035.]
Channel 44: [ 500. 1050.]
Channel 45: [ 532. 1050.]
Channel 46: [ 500. 1065.]
Channel 47: [ 532. 1065.]
Channel 48: [ 500. 1080.]
Channel 49: [ 532. 1080.]
Channel 50: [ 500. 1095.]
Channel 51: [ 532. 1095.]
Channel 52: [ 500. 1110.]
Channel 53: [ 532. 1110.]
Channel 54: [ 500. 1125.]
Channel 55: [ 532. 1125.]
Channel 56: [ 500. 1140.]
Channel 57: [ 532. 1140.]
Channel 58: [ 500. 1155.]
Channel 59: [ 532. 1155.]
Channel 60: [ 500. 1170.]
Channel 61: [ 532. 1170.]
Channel 62: [ 500. 1185.]
Channel 63: [ 532. 1185.]
Channel 64: [ 500. 1200.]
Channel 65: [ 532. 1200.]
Channel 66: [ 500. 1215.]
Channel 67: [ 532. 1215.]
Channel 68: [ 500. 1230.]
Channel 69: [ 532. 1230.]
Channel 70: [ 500. 1245.]
Channel 71: [ 532. 1245.]
Channel 72: [ 500. 1260.]
Channel 73: [ 532. 1260.]
Channel 74: [ 500. 1275.]
Channel 75: [ 532. 1275.]
Channel 76: [ 500. 1290.]
Channel 77: [ 532. 1290.]
Channel 78: [ 500. 1305.]
Channel 79: [ 532. 1305.]
Channel 80: [ 500. 1320.]
Channel 81: [ 532. 1320.]
Channel 82: [ 500. 1335.]
Channel 83: [ 532. 1335.]
Channel 84: [ 500. 1350.]
Channel 85: [ 532. 1350.]
Channel 86: [ 500. 1365.]
Channel 87: [ 532. 1365.]
Channel 88: [ 500. 1380.]
Channel 89: [ 532. 1380.]
Channel 90: [ 500. 1395.]
Channel 91: [ 532. 1395.]
Channel 92: [ 500. 1410.]
Channel 93: [ 532. 1410.]
Channel 94: [ 500. 1425.]
Channel 95: [ 532. 1425.]
Channel 96: [500.   0.]
Channel 97: [532.   0.]
Channel 98: [500.  15.]
Channel 99: [532.  15.]
Channel 100: [500.  30.]
Channel 101: [532.  30.]
Channel 102: [500.  45.]
Channel 103: [532.  45.]
Channel 104: [500.  60.]
Channel 105: [532.  60.]
Channel 106: [500.  75.]
Channel 107: [532.  75.]
Channel 108: [500.  90.]
Channel 109: [532.  90.]
Channel 110: [500. 105.]
Channel 111: [532. 105.]
Channel 112: [500. 120.]
Channel 113: [532. 120.]
Channel 114: [500. 135.]
Channel 115: [532. 135.]
Channel 116: [500. 150.]
Channel 117: [532. 150.]
Channel 118: [500. 165.]
Channel 119: [532. 165.]
Channel 120: [500. 180.]
Channel 121: [532. 180.]
Channel 122: [500. 195.]
Channel 123: [532. 195.]
Channel 124: [500. 210.]
Channel 125: [532. 210.]
Channel 126: [500. 225.]
Channel 127: [532. 225.]
Channel 128: [500. 240.]
Channel 129: [532. 240.]
Channel 130: [500. 255.]
Channel 131: [532. 255.]
Channel 132: [500. 270.]
Channel 133: [532. 270.]
Channel 134: [500. 285.]
Channel 135: [532. 285.]
Channel 136: [500. 300.]
Channel 137: [532. 300.]
Channel 138: [500. 315.]
Channel 139: [532. 315.]
Channel 140: [500. 330.]
Channel 141: [532. 330.]
Channel 142: [500. 345.]
Channel 143: [532. 345.]
Channel 144: [500. 360.]
Channel 145: [532. 360.]
Channel 146: [500. 375.]
Channel 147: [532. 375.]
Channel 148: [500. 390.]
Channel 149: [532. 390.]
Channel 150: [500. 405.]
Channel 151: [532. 405.]
Channel 152: [500. 420.]
Channel 153: [532. 420.]
Channel 154: [500. 435.]
Channel 155: [532. 435.]
Channel 156: [500. 450.]
Channel 157: [532. 450.]
Channel 158: [500. 465.]
Channel 159: [532. 465.]
Channel 160: [500. 480.]
Channel 161: [532. 480.]
Channel 162: [500. 495.]
Channel 163: [532. 495.]
Channel 164: [500. 510.]
Channel 165: [532. 510.]
Channel 166: [500. 525.]
Channel 167: [532. 525.]
Channel 168: [500. 540.]
Channel 169: [532. 540.]
Channel 170: [500. 555.]
Channel 171: [532. 555.]
Channel 172: [500. 570.]
Channel 173: [532. 570.]
Channel 174: [500. 585.]
Channel 175: [532. 585.]
Channel 176: [500. 600.]
Channel 177: [532. 600.]
Channel 178: [500. 615.]
Channel 179: [532. 615.]
Channel 180: [500. 630.]
Channel 181: [532. 630.]
Channel 182: [500. 645.]
Channel 183: [532. 645.]
Channel 184: [500. 660.]
Channel 185: [532. 660.]
Channel 186: [500. 675.]
Channel 187: [532. 675.]
Channel 188: [500. 690.]
Channel 189: [532. 690.]
Channel 190: [500. 705.]
Channel 191: [532. 705.]
Loading traces
*** MS5 Elapsed time for load_traces: 0.000 seconds ***
Detecting spikes

Adjacency for detect spikes with channel radius 200
[[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53], [0, 1, 2, 3, 4, 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189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191]]

m = 0 (nbhd size: 54)
m = 1 (nbhd size: 54)
m = 2 (nbhd size: 54)
m = 3 (nbhd size: 54)
m = 4 (nbhd size: 54)
m = 5 (nbhd size: 54)
m = 6 (nbhd size: 54)
m = 7 (nbhd size: 54)
m = 8 (nbhd size: 54)
m = 9 (nbhd size: 54)
m = 10 (nbhd size: 54)
m = 11 (nbhd size: 54)
m = 12 (nbhd size: 54)
m = 13 (nbhd size: 54)
m = 14 (nbhd size: 54)
m = 15 (nbhd size: 54)
m = 16 (nbhd size: 54)
m = 17 (nbhd size: 54)
m = 18 (nbhd size: 54)
m = 19 (nbhd size: 54)
m = 20 (nbhd size: 54)
m = 21 (nbhd size: 54)
m = 22 (nbhd size: 54)
m = 23 (nbhd size: 54)
m = 24 (nbhd size: 54)
m = 25 (nbhd size: 54)
m = 26 (nbhd size: 54)
m = 27 (nbhd size: 54)
m = 28 (nbhd size: 54)
m = 29 (nbhd size: 54)
m = 30 (nbhd size: 54)
m = 31 (nbhd size: 54)
m = 32 (nbhd size: 54)
m = 33 (nbhd size: 54)
m = 34 (nbhd size: 54)
m = 35 (nbhd size: 54)
m = 36 (nbhd size: 54)
m = 37 (nbhd size: 54)
m = 38 (nbhd size: 54)
m = 39 (nbhd size: 54)
m = 40 (nbhd size: 54)
m = 41 (nbhd size: 54)
m = 42 (nbhd size: 54)
m = 43 (nbhd size: 54)
m = 44 (nbhd size: 54)
m = 45 (nbhd size: 54)
m = 46 (nbhd size: 54)
m = 47 (nbhd size: 54)
m = 48 (nbhd size: 54)
m = 49 (nbhd size: 54)
m = 50 (nbhd size: 54)
m = 51 (nbhd size: 54)
m = 52 (nbhd size: 54)
m = 53 (nbhd size: 54)
m = 54 (nbhd size: 54)
m = 55 (nbhd size: 54)
m = 56 (nbhd size: 54)
m = 57 (nbhd size: 54)
m = 58 (nbhd size: 54)
m = 59 (nbhd size: 54)
m = 60 (nbhd size: 54)
m = 61 (nbhd size: 54)
m = 62 (nbhd size: 54)
m = 63 (nbhd size: 54)
m = 64 (nbhd size: 54)
m = 65 (nbhd size: 54)
m = 66 (nbhd size: 54)
m = 67 (nbhd size: 54)
m = 68 (nbhd size: 54)
m = 69 (nbhd size: 54)
m = 70 (nbhd size: 52)
m = 71 (nbhd size: 52)
m = 72 (nbhd size: 50)
m = 73 (nbhd size: 50)
m = 74 (nbhd size: 48)
m = 75 (nbhd size: 48)
m = 76 (nbhd size: 46)
m = 77 (nbhd size: 46)
m = 78 (nbhd size: 44)
m = 79 (nbhd size: 44)
m = 80 (nbhd size: 42)
m = 81 (nbhd size: 42)
m = 82 (nbhd size: 40)
m = 83 (nbhd size: 40)
m = 84 (nbhd size: 38)
m = 85 (nbhd size: 38)
m = 86 (nbhd size: 36)
m = 87 (nbhd size: 36)
m = 88 (nbhd size: 34)
m = 89 (nbhd size: 34)
m = 90 (nbhd size: 32)
m = 91 (nbhd size: 32)
m = 92 (nbhd size: 30)
m = 93 (nbhd size: 30)
m = 94 (nbhd size: 28)
m = 95 (nbhd size: 28)
m = 96 (nbhd size: 28)
m = 97 (nbhd size: 28)
m = 98 (nbhd size: 30)
m = 99 (nbhd size: 30)
m = 100 (nbhd size: 32)
m = 101 (nbhd size: 32)
m = 102 (nbhd size: 34)
m = 103 (nbhd size: 34)
m = 104 (nbhd size: 36)
m = 105 (nbhd size: 36)
m = 106 (nbhd size: 38)
m = 107 (nbhd size: 38)
m = 108 (nbhd size: 40)
m = 109 (nbhd size: 40)
m = 110 (nbhd size: 42)
m = 111 (nbhd size: 42)
m = 112 (nbhd size: 44)
m = 113 (nbhd size: 44)
m = 114 (nbhd size: 46)
m = 115 (nbhd size: 46)
m = 116 (nbhd size: 48)
m = 117 (nbhd size: 48)
m = 118 (nbhd size: 50)
m = 119 (nbhd size: 50)
m = 120 (nbhd size: 52)
m = 121 (nbhd size: 52)
m = 122 (nbhd size: 54)
m = 123 (nbhd size: 54)
m = 124 (nbhd size: 54)
m = 125 (nbhd size: 54)
m = 126 (nbhd size: 54)
m = 127 (nbhd size: 54)
m = 128 (nbhd size: 54)
m = 129 (nbhd size: 54)
m = 130 (nbhd size: 54)
m = 131 (nbhd size: 54)
m = 132 (nbhd size: 54)
m = 133 (nbhd size: 54)
m = 134 (nbhd size: 54)
m = 135 (nbhd size: 54)
m = 136 (nbhd size: 54)
m = 137 (nbhd size: 54)
m = 138 (nbhd size: 54)
m = 139 (nbhd size: 54)
m = 140 (nbhd size: 54)
m = 141 (nbhd size: 54)
m = 142 (nbhd size: 54)
m = 143 (nbhd size: 54)
m = 144 (nbhd size: 54)
m = 145 (nbhd size: 54)
m = 146 (nbhd size: 54)
m = 147 (nbhd size: 54)
m = 148 (nbhd size: 54)
m = 149 (nbhd size: 54)
m = 150 (nbhd size: 54)
m = 151 (nbhd size: 54)
m = 152 (nbhd size: 54)
m = 153 (nbhd size: 54)
m = 154 (nbhd size: 54)
m = 155 (nbhd size: 54)
m = 156 (nbhd size: 54)
m = 157 (nbhd size: 54)
m = 158 (nbhd size: 54)
m = 159 (nbhd size: 54)
m = 160 (nbhd size: 54)
m = 161 (nbhd size: 54)
m = 162 (nbhd size: 54)
m = 163 (nbhd size: 54)
m = 164 (nbhd size: 54)
m = 165 (nbhd size: 54)
m = 166 (nbhd size: 54)
m = 167 (nbhd size: 54)
m = 168 (nbhd size: 54)
m = 169 (nbhd size: 54)
m = 170 (nbhd size: 54)
m = 171 (nbhd size: 54)
m = 172 (nbhd size: 54)
m = 173 (nbhd size: 54)
m = 174 (nbhd size: 54)
m = 175 (nbhd size: 54)
m = 176 (nbhd size: 54)
m = 177 (nbhd size: 54)
m = 178 (nbhd size: 54)
m = 179 (nbhd size: 54)
m = 180 (nbhd size: 54)
m = 181 (nbhd size: 54)
m = 182 (nbhd size: 54)
m = 183 (nbhd size: 54)
m = 184 (nbhd size: 54)
m = 185 (nbhd size: 54)
m = 186 (nbhd size: 54)
m = 187 (nbhd size: 54)
m = 188 (nbhd size: 54)
m = 189 (nbhd size: 54)
m = 190 (nbhd size: 54)
m = 191 (nbhd size: 54)
Detected 30 spikes
*** MS5 Elapsed time for detect_spikes: 0.195 seconds ***
Removing duplicate times
*** MS5 Elapsed time for remove_duplicate_times: 0.000 seconds ***
Extracting 28 snippets
*** MS5 Elapsed time for extract_snippets: 0.179 seconds ***
Computing PCA features with npca=576
*** MS5 Elapsed time for compute_pca_features: 0.010 seconds ***
Isosplit6 clustering with npca_per_subdivision=10
Found 1 clusters
*** MS5 Elapsed time for isosplit6_subdivision_method: 0.001 seconds ***
Computing templates
*** MS5 Elapsed time for compute_templates: 0.003 seconds ***
Determining optimal alignment of templates
Template alignment converged.
Align templates offsets:  [0]
*** MS5 Elapsed time for align_templates: 0.001 seconds ***
Aligning snippets
*** MS5 Elapsed time for align_snippets: 0.000 seconds ***
Clustering aligned snippets
Computing PCA features with npca=576
*** MS5 Elapsed time for compute_pca_features: 0.008 seconds ***
Isosplit6 clustering with npca_per_subdivision=10
*** MS5 Elapsed time for isosplit6_subdivision_method: 0.001 seconds ***
Found 1 clusters after alignment
Computing templates
*** MS5 Elapsed time for compute_templates: 0.003 seconds ***
Offsetting times to peak
Offsets to peak: [-20]
*** MS5 Elapsed time for determine_offsets_to_peak: 0.000 seconds ***
Sorting times
*** MS5 Elapsed time for sorting times: 0.000 seconds ***
Removing out of bounds times
*** MS5 Elapsed time for removing out of bounds times: 0.000 seconds ***
Reordering units
*** MS5 Elapsed time for reordering units: 0.000 seconds ***
Creating sorting object
*** MS5 Elapsed time for creating sorting object: 0.000 seconds ***
*** MS5 Elapsed time for SCHEME2 sorting_scheme1: 0.419 seconds ***
*** MS5 Elapsed time for SCHEME2 get_times_labels_from_sorting: 0.000 seconds ***
Loading training traces
*** MS5 Elapsed time for SCHEME2 training_recording.get_traces: 0.000 seconds ***
Training classifier
*** MS5 Elapsed time for SCHEME2 training classifier step 1: 0.512 seconds ***
Adding snippets from phase 1 sorting
Fitting models
*** MS5 Elapsed time for SCHEME2 fitting models: 49.987 seconds ***
Chunk size: 17.361133333333335 sec
Time chunk 1 of 1
Loading traces
*** MS5 Elapsed time for SCHEME2 loading traces: 0.000 seconds ***
Detecting spikes

Adjacency for detect spikes with channel radius 50
[[0, 1, 2, 3, 4, 5, 6, 186, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 7, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 188, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 9, 189, 190, 191], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 190], [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 11, 191], [0, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12], [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 13], [2, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14], [3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 15], [4, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16], [5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 17], [6, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18], [7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 19], [8, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20], [9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21], [10, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22], [11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 23], [12, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24], [13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 25], [14, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26], [15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 27], [16, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28], [17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 29], [18, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30], [19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 31], [20, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32], [21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 33], [22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34], [23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 35], [24, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36], [25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 37], [26, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38], [27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 39], [28, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40], [29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 41], [30, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42], [31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 43], [32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44], [33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 45], [34, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46], [35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47], [36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48], [37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 49], [38, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50], [39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 51], [40, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52], [41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 53], [42, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54], [43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55], [44, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56], [45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 57], [46, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58], [47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 59], [48, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60], [49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 61], [50, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62], [51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 63], [52, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64], [53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 65], [54, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66], [55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 67], [56, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68], [57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 69], [58, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70], [59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 71], [60, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72], [61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 73], [62, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74], [63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 75], [64, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76], [65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 77], [66, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78], [67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 79], [68, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80], [69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 81], [70, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82], [71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 83], [72, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84], [73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 85], [74, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86], [75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 87], [76, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88], [77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 89], [78, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90], [79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 91], [80, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92], [81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 93], [82, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94], [83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 95], [84, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95], [85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95], [86, 88, 89, 90, 91, 92, 93, 94, 95], [87, 88, 89, 90, 91, 92, 93, 94, 95], [88, 90, 91, 92, 93, 94, 95], [89, 90, 91, 92, 93, 94, 95], [96, 97, 98, 99, 100, 101, 102], [96, 97, 98, 99, 100, 101, 103], [96, 97, 98, 99, 100, 101, 102, 103, 104], [96, 97, 98, 99, 100, 101, 102, 103, 105], [96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106], [96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 107], [96, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108], [97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 109], [98, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110], [99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111], [100, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112], [101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 113], [102, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114], [103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 115], [104, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116], [105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 117], [106, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118], [107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 119], [108, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120], [109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 121], [110, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122], [111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 123], [112, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124], [113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 125], [114, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126], [115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 127], [116, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128], [117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 129], [118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130], [119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 131], [120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132], [121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 133], [122, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134], [123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 135], [124, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136], [125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137], [126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], [127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139], [128, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140], [129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 141], [130, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142], [131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 143], [132, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144], [133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 145], [134, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146], [135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 147], [136, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148], [137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 149], [138, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150], [139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 151], [140, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152], [141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 153], [142, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154], [143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 155], [144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156], [145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 157], [146, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158], [147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 159], [148, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160], [149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 161], [150, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162], [151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 163], [152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164], [153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 165], [154, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166], [155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 167], [156, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168], [157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 169], [158, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170], [159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 171], [160, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172], [161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 173], [162, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174], [163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 175], [164, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176], [165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 177], [166, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178], [167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 179], [168, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180], [169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 181], [170, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182], [171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 183], [172, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184], [173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 185], [174, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186], [175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 187], [176, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188], [177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 189], [178, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190], [179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 191], [0, 180, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [1, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 182, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 3, 183, 184, 185, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 4, 184, 186, 187, 188, 189, 190, 191], [0, 1, 2, 3, 5, 185, 186, 187, 188, 189, 190, 191]]

Scheme 2 detected 33 spikes in chunk 1 of 1
*** MS5 Elapsed time for SCHEME2 detecting spikes: 0.242 seconds ***
Extracting and classifying snippets
*** MS5 Elapsed time for SCHEME2 extracting and classifying snippets: 0.112 seconds ***
Updating events
Removing duplicates
*** MS5 Elapsed time for SCHEME2 updating events: 0.000 seconds ***
Concatenating results
*** MS5 Elapsed time for SCHEME2 concatenating results: 0.000 seconds ***
Perorming label mapping
*** MS5 Elapsed time for SCHEME2 label mapping: 0.000 seconds ***
Creating sorting object
*** MS5 Elapsed time for SCHEME2 creating sorting object: 0.000 seconds ***
mountainsort5 run time 62.10s

import spikewrap as sw

session = sw.Session(
    subject_path=sw.get_example_data_path() / "rawdata" / "sub-001",
    session_name="ses-001",
    file_format="spikeglx",  # or "openephys"
    run_names="all"
)

session.preprocess(
    configs="neuropixels+mountainsort5",
    concat_runs=True  # concatenate runs before preprocessing
)

# Optional: session.save_preprocessed(overwrite=True)
# The sorting is run with data generated in the most recent
# `preprocess()` call, even if data is saved.
# If `preprocess()` is not called, saved data will be used.

session.sort(
    "neuropixels+mountainsort5",
    run_sorter_method="local",  # or a path to matlab repository, "singularity" or "docker"
    per_shank=True,
    concat_runs=False,  # concatenate runs before sorting
)